Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015825775.1_cds_XP_016502440.1_16081
CDS Infomation

[gene=LOC107820638] [db_xref=GeneID:107820638] [protein=tRNA dimethylallyltransferase 2-like isoform X3] [protein_id=XP_016502440.1] [location=join(53864..54043,54139..54207,54659..54731,54824..54945,55703..55777,56551..56949,57476..57551,57685..57842,58045..58158)] [gbkey=CDS]
Sequence

ATGGATGCAGTCAATCCCCTCCTCTCCACAGTTGAAAACTTGAAACCTCTATTCAATGAC
CAACAACTCTGGAGCAATGAACTTTGGTTGCTTTTGTCACTAGGCGACGTACCTAACCTA
TCTTTCCCTTTAGCAATATTGATTAGTGTCTTTCAGCCGTCTTCTATAGGAAAATTTGAA
ATCATAAATGAGATATGGTCCCGCAAGAGGTTGCCAGTTATAGTTGGAGGAACAAATTAT
TATATTCAGGCTCTTGCGAGTCCATTCCTTCTTGATGAATCTGTTGAAGATTCAGAATCA
AATTGCTTAAGCGACTCTCAAGAAGATGAACAGCCTGATCTTGAAGTTGAATTTACGGAC
GAGGAATATGATTGTGCTTACAACCGTCTTAAAGATATTGATCCAGTTGCAGCTAACAGA
ATTCATCCAAATAATGATAGAAAGATCAACCAATACCTGAATCTGTATGCACGATTTGGT
GTTATTCCAAGCAAACTTCTTCAGGAGAGAACCGTAGAGAACTGGGGTCGAGTTGATAAT
TCAAGATATGATTTCTGCTTCTTATGCGTGAATGCATCTCTTTCCACTATGGATCCATTT
GTCAATAAAAGAGTTGATCACATGGTTGATGCTGGTCTACTTGTGGAAGTTGTTGACATC
TATACACTGGATGCAGACTATACAAAGGGCTTGAGGCAGGCCATTGGTGTTAGGGAATTT
GAGTTTTTTCTTGGACGTCACATACTGGAACATCAAAAACCCTGTGATGAATCTTACCTT
CAGGCACTAAATGATCAGACATTGAAGCAGAATATACATCATATCATGGATTCCCCTGAC
AACAATGAACAGAAAGCTCTTTTAATTGAAGCAATTGAAAATGTCAAACTGAACACACGA
AGACTTGTACGGCGTCAAAGGAGGAGGCTTAATCGGCTGCAGATGCTGTTTGGATGGAAC
ATACATTATGTTGATGCTACAAAGTCCATAATAAGTGGCTCTGATGGTGTATGGGTAGTG
GAAGTGGTCGAACCCTCTGCGAGAATAATCAAATCCTTTCTCACTGGAGAATGCAGCACA
GAGAATGGCAGCAATGCTTCTGAAGAAATGAGGTTGATGCAAAAGGATCTCTGGACTCGG
CATGTATGCGAGGCATGTGGGAATAAGGTCCTCAGAGGTGCGCATGAATGGGAACAACAC
AGAGAGGGCCGTGGCCATCGAAAACGAGTTTCTCGGCTTAAAAAGTCTGGAAACTTGTGC
TCGTGA

Peptide Sequence

PEP ID

XP_016502440.1
PEP Infomation

PREDICTED: tRNA dimethylallyltransferase 2-like isoform X3 [Nicotiana tabacum]
Sequence

MDAVNPLLSTVENLKPLFNDQQLWSNELWLLLSLGDVPNLSFPLAILISVFQPSSIGKFE
IINEIWSRKRLPVIVGGTNYYIQALASPFLLDESVEDSESNCLSDSQEDEQPDLEVEFTD
EEYDCAYNRLKDIDPVAANRIHPNNDRKINQYLNLYARFGVIPSKLLQERTVENWGRVDN
SRYDFCFLCVNASLSTMDPFVNKRVDHMVDAGLLVEVVDIYTLDADYTKGLRQAIGVREF
EFFLGRHILEHQKPCDESYLQALNDQTLKQNIHHIMDSPDNNEQKALLIEAIENVKLNTR
RLVRRQRRRLNRLQMLFGWNIHYVDATKSIISGSDGVWVVEVVEPSARIIKSFLTGECST
ENGSNASEEMRLMQKDLWTRHVCEACGNKVLRGAHEWEQHREGRGHRKRVSRLKKSGNLC
S

Transcript Sequence

Gene sequence data has not been registered.